shasta (0.14.0-1ubuntu1) resolute; urgency=medium

  * remove boost-system dependency (LP: #2141453)
    - d/p/remove-boost-system-dependency: remove obsolete library
    - d/control: remove depends on libboost-system-dev

 -- Jonas Jelten <jj@ubuntu.com>  Thu, 12 Feb 2026 17:14:27 +0100

shasta (0.14.0-1build1) resolute; urgency=medium

  * No-change rebuild for boost 1.90.

 -- Matthias Klose <doko@ubuntu.com>  Wed, 04 Feb 2026 14:20:51 +0100

shasta (0.14.0-1) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * Team upload.
  * New upstream version
  * Support the "nodoc" and "nocheck" build profiles, increasing
    cross-buildability.
  * Added patch to keep debug information.
  * d/rules: save time by not building the static library.
  * d/upstream/metadata: new upstream location
  * d/control: move docs build-deps to the architecture independent
    list.
  * Strip unusual field spacing from debian/control.
  * d/control: Needs newer SeqAn2 2.5.0+. Closes: #1125658
  * Standards-Version: 4.7.3 (routine-update)

  [ Andreas Tille ]
  * d/watch: version=5
  * Standards-Version: 4.7.2 (routine-update)
  * Compatibility for boost 1.88
    Closes: #1110602
  * Salsa CI: release: experimental

 -- Michael R. Crusoe <crusoe@debian.org>  Sat, 24 Jan 2026 17:54:34 +0100

shasta (0.12.0-1) unstable; urgency=medium

  * New upstream version 0.12.0
  * gcc-13.patch: delete: applied upstream.
  * gcc-13-bis.patch: delete: applied upstream.
  * d/control: declare compliance to standards version 4.7.0.

 -- Étienne Mollier <emollier@debian.org>  Sun, 26 May 2024 18:05:55 +0200

shasta (0.11.1-5) unstable; urgency=medium

  * d/rules: meddle with RPATH only after dh_shlibdeps. (Closes: #1069370)

 -- Étienne Mollier <emollier@debian.org>  Wed, 08 May 2024 22:02:57 +0200

shasta (0.11.1-4) unstable; urgency=medium

  * gcc-13-bis.patch: new: fix ftbfs with gcc 13.2.0. (Closes: #1059139)

 -- Étienne Mollier <emollier@debian.org>  Wed, 20 Dec 2023 16:50:12 +0100

shasta (0.11.1-3) unstable; urgency=medium

  * d/t/run-unit-test: use older shasta config.
    The original test shipped with Nanopore-Sep2020 configuration file
    selected by shasta in the autopkgtest script.  This caused shasta to
    reserve 8GiB of RAM on CI test hosts, which is just the limit on the
    arm64 runners.  Dropping to the older Nanopore-Dec2019 configuration
    file causes shasta to reserve memory as needed instead of prefetching
    a huge amount of pages, causing out of memory conditions on runners.
    (Closes: #1053509)

 -- Étienne Mollier <emollier@debian.org>  Mon, 04 Dec 2023 16:48:02 +0100

shasta (0.11.1-2) unstable; urgency=medium

  * gcc-13.patch: new: fix build failures with gcc-13. (Closes: #1042196)
  * d/clean: remove build remnants.
  * d/control: add myself to uploaders.
  * d/control: split python3-dev build dependency.
    This is the first step of many to enable cross compilation.
  * d/control: declare compliance to standards version 4.6.2.
  * d/salsa-ci.yml: fix yaml invalid error caught by salsa.

 -- Étienne Mollier <emollier@debian.org>  Wed, 23 Aug 2023 17:26:58 +0200

shasta (0.11.1-1) unstable; urgency=medium

  * Team upload
  * Upstream repository moved from github.com/chanzuckerberg/shasta
    to github.com/paoloshasta/shasta

 -- Andreas Tille <tille@debian.org>  Mon, 12 Dec 2022 09:50:09 +0100

shasta (0.10.0-2) unstable; urgency=medium

  * Team upload.
  * Fix watch file
  * lintian-override for custom-library-search-path
  * Fix location of file in d/copyright

 -- Andreas Tille <tille@debian.org>  Tue, 06 Dec 2022 07:51:25 +0100

shasta (0.10.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream version 0.10.0
  * Bump Standards-Version to 4.6.1 (no changes needed)
  * Update install in acc with upstream renamed executable
  * Drop modify_cmakelists.patch, set needed vars from d/rules
  * Drop upstream patch
  * Refresh patches

 -- Nilesh Patra <nilesh@debian.org>  Sat, 28 May 2022 13:06:01 +0530

shasta (0.8.0-2) unstable; urgency=medium

  * Team Upload.
  * Cherry-pick upstream patch to fix FTBFS (Closes: #1002142)

 -- Nilesh Patra <nilesh@debian.org>  Tue, 04 Jan 2022 01:10:16 +0530

shasta (0.8.0-1) unstable; urgency=medium

  * Team upload.

  [ Steffen Moeller ]
  * Fix watchfile to detect new versions on github (routine-update)

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)

  [ Nilesh Patra ]
  * d/control: Add libblas-dev,liblapack-dev,gfortran to B-D
  * d/t/run-unit-test: Specify a --config builtin for running test on sample
    data

 -- Andreas Tille <tille@debian.org>  Thu, 14 Oct 2021 08:17:30 +0200

shasta (0.7.0-3) unstable; urgency=medium

  * Team upload.
  * python3-shasta: Remove explicit depends on many libraries,
    ${shlibs:Depends} covers the needful.

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 13 Jan 2021 10:43:17 +0100

shasta (0.7.0-2) unstable; urgency=medium

  * Team upload.
  * make use of ${sphinxdoc:Built-Using}
  * debian/tests/control: specifically depend on the binary packages
  * debian/control: document why package is amd64/arm64 only

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 12 Jan 2021 13:08:34 +0100

shasta (0.7.0-1) unstable; urgency=medium

  * Team upload.

  [ Michael R. Crusoe ]
  * debian/patches/libspoa7.0.0: adapt to spoa 4.0.6 (Closes: #979704)
  * Fix some typos.

  [ Juhani Numminen ]
  * Fix binary-indep FTBFS: add suffix -arch in execute_after_dh_python3-arch.

  [ Andreas Tille ]
  * New upstream version
  * Build-Depends: libcpu-features-dev

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 11 Jan 2021 16:28:10 +0100

shasta (0.6.0-5) unstable; urgency=medium

  * Team upload.
  * Do not explicitly Depend libboost-chrono1.71.0 and use ${shlibs:Depends}
    instead
    Closes: #977308

 -- Andreas Tille <tille@debian.org>  Sat, 19 Dec 2020 20:46:29 +0100

shasta (0.6.0-4) unstable; urgency=medium

  * Team Upload.
  * Modify install paths (Closes: #972921)
  * Fix installmissing

 -- Nilesh Patra <npatra974@gmail.com>  Wed, 09 Dec 2020 12:05:18 +0000

shasta (0.6.0-3) unstable; urgency=medium

  * Team upload.
  * python3-shasta: any-amd64 arm64

 -- Andreas Tille <tille@debian.org>  Mon, 07 Dec 2020 17:49:17 +0100

shasta (0.6.0-2) unstable; urgency=medium

  [ Andreas Tille ]
  * Team upload.
  * Enable binary-all build
    Closes: #972921
  * Architecture: any-amd64 arm64
    Closes: #972922
  * Do not override dh_missing, try to install the files from debian/tmp
    or remove them before dh_missing is called
  * Make sure shared library will fit default Python3 version
  * dh_missing --fail-missing
  * Standards-Version: 5.4.1

  [ Shayan Doust ]
  * build depends python3-dev instead of python3-all-dev
    Closes: #973427

 -- Andreas Tille <tille@debian.org>  Mon, 07 Dec 2020 14:37:49 +0100

shasta (0.6.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Remove trailing whitespace in debian/copyright (routine-update)
  * Move source package lintian overrides to debian/source.

 -- Andreas Tille <tille@debian.org>  Fri, 23 Oct 2020 14:49:17 +0200

shasta (0.5.1-1) unstable; urgency=medium

  * Initial release (Closes: #968716)

 -- Shayan Doust <hello@shayandoust.me>  Thu, 20 Aug 2020 16:47:28 +0000
